Details

Study Basic Information

PERELLO_summer15
Phenotypic characterization of Spanish TRADITOM fresh consume subset in PERELLO field (El Perelló, Valencia, Spain) during summer 2015
Phenotypic evaluation of 76 traits related to plant architecture, fruit shape, size, colour and quality and GWAS analysis
summer

Study Location Information

PERELLO
Coop. V. Unión Protectora del Perelló
ESP
Private
greenhouse study
Culture in open ground under net greenhouse with drip system.
Just after transplant plants were watered by flood irrigation. Next watering (by drip irrigation) took place three weeks after transplant; subsequent waterings (by drip irrigation) were made according to the needs of the plants. weeds were removed manually and phytosanitary treatments were made when needed.

1) Fine silt(%) = 0
2) Clay(%) = 8.85
3) EC(dS/m) = 0.35
4) Nitrogen(kg ha-1) = 220
5) Organic matter content(% dry matter basis) = 2.3
6) pH(dimensionless) = 8.11
7) Phosphate(kg ha-1) = 50
8) Potassium(kg ha-1) = 280
9) Silt(%) = 5
10) Total sand (%) = 86.15
11) USDA Soil texture classe(dimensionless) = Loamy sand
12) air temperature maximum value(degree Celsius) = 32.7
13) air temperature minimum value(degree Celsius) = 12.5
14) air temperature mean value(degree Celsius) = 18.5

Experimental Design Information

Plot design
Each plot corresponded to one accession
Observation units consited on individual plots or plants in plots. Plots consisting in a row of 6 plants

Related GWAS Summary 1

GWAS Name ID Software GWAS Model
GWAS_PERELLO_summer15 R/GAPIT Mixed linear model (MLM)

Related Germplasms Summary 214

Germplasm ID INSTCODE Accession
TRCA0010 FMA-UPC LC433
TRCA0020 FMA-UPC LC95
TRCA0130 FMA-UPC BGV002125
TRCA0280 FMA-UPC BGV002050
TRCA0420 FMA-UPC BGV002152
TRCA0480 FMA-UPC BGV002231
TRIS0010 REHOVOT DZ 52
TRIS0020 REHOVOT 9457 cherry
TRIS0030 REHOVOT 9466 jj
TRMO0010 INRAe-AVIGNON T100534
TRMO0020 INRAe-AVIGNON T100938
TRMO0030 INRAe-AVIGNON T101774
TRMO0040 INRAe-AVIGNON T101948
TRPO0010 IBBR-CNR-Portici TRPO0010
TRPO0020 ARCA2010 TRPO0020
TRPO0030 ARCA2010 TRPO0030
TRPO0040 ARCA2010 TRPO0040
TRTH0010 AUTh TRTH0010
TRTH0020 AUTh TRTH0020
TRTH0030 AUTh TRTH0030
TRVA0010 BGUPV BGV005643
TRVA0020 COMAV PE1
TRVA0030 COMAV ALX1
TRVA0110 BGUPV BGV000094
TRVA0120 BGUPV BGV000096
TRVA0130 BGUPV BGV000098
TRVA0140 BGUPV BGV000109
TRVA0150 BGUPV BGV000110
TRVA0160 BGUPV BGV000111
TRVA0180 BGUPV BGV000904
TRVA0190 BGUPV BGV000909
TRVA0220 BGUPV BGV000928
TRVA0230 BGUPV BGV000932
TRVA0240 BGUPV BGV000934
TRVA0260 BGUPV BGV000942
TRVA0270 BGUPV BGV000954
TRVA0280 BGUPV BGV000965
TRVA0320 BGUPV BGV000989
TRVA0330 BGUPV BGV000999
TRVA0340 BGUPV BGV001000
TRVA0350 BGUPV BGV001002
TRVA0370 BGUPV BGV001027
TRVA0380 BGUPV BGV001029
TRVA0400 BGUPV BGV001031
TRVA0420 BGUPV BGV001066
TRVA0430 BGUPV BGV001070
TRVA0440 BGUPV BGV001071
TRVA0450 BGUPV BGV001086
TRVA0490 BGUPV BGV001546
TRVA0570 BGUPV BGV002089
TRVA0580 BGUPV BGV002092
TRVA0600 BGUPV BGV002103
TRVA0610 BGUPV BGV002108
TRVA0630 BGUPV BGV002129
TRVA0700 BGUPV BGV002220
TRVA0730 BGUPV BGV002243
TRVA0810 BGUPV BGV002993
TRVA0820 BGUPV BGV003015
TRVA0830 BGUPV BGV003018
TRVA0840 BGUPV BGV003052
TRVA0850 BGUPV BGV003059
TRVA0860 BGUPV BGV003070
TRVA0870 BGUPV BGV003080
TRVA0880 BGUPV BGV003086
TRVA0890 BGUPV BGV003088
TRVA0910 BGUPV BGV003130
TRVA0920 BGUPV BGV003132
TRVA0930 BGUPV BGV003493
TRVA0940 BGUPV BGV003497
TRVA0950 BGUPV BGV003498
TRVA0960 BGUPV BGV003511
TRVA0970 BGUPV BGV003516
TRVA0980 BGUPV BGV003519
TRVA0990 BGUPV BGV003524
TRVA1020 BGUPV BGV003874
TRVA1030 BGUPV BGV003887
TRVA1040 BGUPV BGV003890
TRVA1080 BGUPV BGV003925
TRVA1090 BGUPV BGV003928
TRVA1100 BGUPV BGV004123
TRVA1110 BGUPV BGV004377
TRVA1120 BGUPV BGV004378
TRVA1160 BGUPV BGV004407
TRVA1170 BGUPV BGV004421
TRVA1190 BGUPV BGV004464
TRVA1200 BGUPV BGV004486
TRVA1210 BGUPV BGV004521
TRVA1230 BGUPV BGV005411
TRVA1250 BGUPV BGV005415
TRVA1260 BGUPV BGV005418
TRVA1280 BGUPV BGV005420
TRVA1290 BGUPV BGV005423
TRVA1300 BGUPV BGV005425
TRVA1330 BGUPV BGV005431
TRVA1350 BGUPV BGV005435
TRVA1370 BGUPV BGV005450
TRVA1380 BGUPV BGV005453
TRVA1440 BGUPV BGV005471
TRVA1450 BGUPV BGV005478
TRVA1460 BGUPV BGV005482
TRVA1510 BGUPV BGV005495
TRVA1530 BGUPV BGV005498
TRVA1560 BGUPV BGV005508
TRVA1620 BGUPV BGV005520
TRVA1680 BGUPV BGV005544
TRVA1690 BGUPV BGV005554
TRVA1700 BGUPV BGV005557
TRVA1740 BGUPV BGV005577
TRVA1770 BGUPV BGV005588
TRVA1800 BGUPV BGV005615
TRVA1820 BGUPV BGV005624
TRVA1830 BGUPV BGV005625
TRVA1840 BGUPV BGV005627
TRVA1850 BGUPV BGV005641
TRVA1860 BGUPV BGV005642
TRVA1880 BGUPV BGV005645
TRVA1890 BGUPV BGV005648
TRVA1900 BGUPV BGV005649
TRVA1910 BGUPV BGV005650
TRVA1940 BGUPV BGV005654
TRVA1950 BGUPV BGV005655
TRVA1960 BGUPV BGV005656
TRVA1970 BGUPV BGV005657
TRVA1980 BGUPV BGV005658
TRVA1990 BGUPV BGV005659
TRVA2040 BGUPV BGV005668
TRVA2050 BGUPV BGV005670
TRVA2070 BGUPV BGV005673
TRVA2080 BGUPV BGV005687
TRVA2090 BGUPV BGV005690
TRVA2100 BGUPV BGV005699
TRVA2110 BGUPV BGV005703
TRVA2120 BGUPV BGV005707
TRVA2130 BGUPV BGV005709
TRVA2150 BGUPV BGV005718
TRVA2160 BGUPV IVIA-355
TRVA2170 BGUPV IVIA-523
TRVA2190 BGUPV BGV009558
TRVA2210 BGUPV BGV009778
TRVA2220 BGUPV BGV009790
TRVA2270 BGUPV NR0044
TRVA2320 BGUPV BGV012486
TRVA2330 BGUPV BGV012490
TRVA2340 BGUPV BGV012502
TRVA2350 BGUPV BGV012503
TRVA2360 BGUPV NR0083
TRVA2370 BGUPV NR0084
TRVA2380 BGUPV NR0090
TRVA2390 BGUPV BGV012839
TRVA2400 BGUPV BGV012840
TRVA2410 BGUPV BGV012843
TRVA2420 BGUPV BGV012844
TRVA2430 BGUPV BGV012845
TRVA2440 BGUPV BGV013205
TRVA2470 BGUPV BGV013949
TRVA2480 BGUPV BGV013964
TRVA2490 BGUPV BGV013965
TRVA2500 BGUPV BGV014181
TRVA2530 BGUPV BGV014533
TRVA2550 BGUPV BGV014539
TRVA2560 BGUPV BGV014661
TRVA2570 BGUPV BGV014718
TRVA2580 BGUPV BGV014787
TRVA2590 BGUPV BGV014788
TRVA2610 BGUPV BGV014804
TRVA2620 BGUPV BGV014805
TRVA2630 BGUPV BGV014807
TRVA2750 BGUPV BGV015828
TRVA2760 BGUPV BGV015830
TRVA2770 BGUPV BGV015832
TRVA2910 COMAV ADZ3
TRVA2920 COMAV AG1
TRVA2930 COMAV AG5
TRVA2940 COMAV AG7
TRVA2950 COMAV AL1
TRVA2960 COMAV ALG2
TRVA2970 COMAV BOC1
TRVA2980 COMAV BUR1
TRVA2990 COMAV CAMP1
TRVA3000 COMAV CAST1
TRVA3010 COMAV CC1
TRVA3020 COMAV CINC3
TRVA3030 COMAV F1
TRVA3040 COMAV FONT1
TRVA3050 COMAV LE1
TRVA3060 COMAV MA1
TRVA3070 COMAV MOR2
TRVA3080 COMAV NAQ1
TRVA3090 COMAV O3
TRVA3100 COMAV P1
TRVA3110 COMAV PIN1
TRVA3120 COMAV PUÇ1
TRVA3130 COMAV PUIG1
TRVA3140 COMAV PV1
TRVA3150 COMAV R2
TRVA3160 COMAV S1
TRVA3170 COMAV SA1
TRVA3180 COMAV SAG1
TRVA3190 COMAV SI1
TRVA3200 COMAV SJA1
TRVA3210 COMAV SUE1
TRVA3220 COMAV TO1
TRVA3230 COMAV TOR1
TRVA3240 COMAV TT1
TRVA3250 COMAV TUR1
TRVA3260 COMAV U1
TRVA3270 COMAV XA1
TRVA3280 COMAV XE1
TRVI0010 ITA062 V710148
TRVI0020 ITA062 V710150
TRVI0030 ITA062 V710171
TRVI0040 ITA062 V710301
TRVI0050 ITA062 V710314
TRVI0060 ITA062 V711278