HarnessTom Database

HarnesstomDB is a comprehensive publicly available open-source multi-omics database for facilitating the use of the potential of tomato germplasm collections for breeding. HarnesstomDB V1.0 (March 2022) enables to store, integrate and interconnect curated omics data and metadata from different projects, trials and experiments including images using a controlled vocabulary and accepted standards.

Overview

Germplasm Summary

Accessions
17616

Mapping Populations
1

Experiment Summary

Trials
8

Studies
28

Phenotyping Summary

Observations Variables
181

Metabolites
872

Genotyping Summary

Markers
127809

Genotyping Platforms
5

Variant Studies

QTL Studies
3

GWAS
9

Variant Summary

QTL Variant
21

GWAS Variant
773
Accessions by countries
Biological Status Of Accession

Germplasms Some of our germplasms

TRMO0010

The appearance of whole TRMO0010 plant in CONC1_summer15

Anatomical Entity: whole plant

TRMO0020

Longitudinal section of TRMO0020 red ripe fruits in CONC1_summer15

Stage: Red ripe Anatomical Entity: fruit

TRMO0020

Transversal section of TRMO0020 red ripe fruits in CONC1_summer15

Stage: Red ripe Anatomical Entity: fruit

TRMO0020

Transversal section of TRMO0020 red ripe fruits in CONC1_summer15

Stage: Red ripe Anatomical Entity: fruit

TRMO0020

TRMO0020 red ripe fruits in CONC1_summer15

Stage: Red ripe Anatomical Entity: fruit

TRMO0020

TRMO0020 red ripe fruits in CONC1_summer15

Stage: Red ripe Anatomical Entity: fruit

TRMO0020

Appearence of TRMO0020 leaf in CONC1_summer15

Anatomical Entity: leaf

TRMO0020

The appearance of whole TRMO0020 plant in CONC1_summer15

Anatomical Entity: whole plant

Videos tutorials

Main sources and collaborators

Below are the project partners & collaborators.