HarnessTom Database

HarnesstomDB is a comprehensive publicly available open-source multi-omics database for facilitating the use of the potential of tomato germplasm collections for breeding. HarnesstomDB V1.0 (March 2022) enables to store, integrate and interconnect curated omics data and metadata from different projects, trials and experiments including images using a controlled vocabulary and accepted standards.

Overview

Germplasm Summary

Accessions
165

Mapping Populations
1

Experiment Summary

Trials
1

Studies
1

Phenotyping Summary

Observations Variables
2

Metabolites
7

Genotyping Summary

Markers
1021

Genotyping Platforms
1

Variant Studies

QTL Studies
1

GWAS
1

Variant Summary

QTL Variant
1

GWAS Variant
7
Accessions by countries
+
Biological Status Of Accession

Germplasms Some of our germplasms

TRCA0130

TRCA0130 fruits in PERELLO_summer15

Stage: fruit ripening stage Anatomical Entity: fruit

TRCA0130

TRCA0130 fruits in PERELLO_summer15

Stage: fruit ripening stage Anatomical Entity: fruit

TRCA0130

TRCA0130 fruits in PERELLO_summer15

Stage: fruit ripening stage Anatomical Entity: fruit

TRCA0130

TRCA0130 fruits in PERELLO_summer15

Stage: fruit ripening stage Anatomical Entity: fruit

TRCA0130

Inflorescence of TRCA0130 in PERELLO_summer15

Anatomical Entity: inflorescence

TRCA0130

Inflorescence of TRCA0130 in PERELLO_summer15

Anatomical Entity: inflorescence

TRCA0130

The appearance of whole TRCA0130 plant in PERELLO_summer15

Anatomical Entity: whole plant

TRCA0130

The appearance of whole TRCA0130 plant in PERELLO_summer15

Anatomical Entity: whole plant

Videos tutorials

Main sources and collaborators

Below are the project partners & collaborators.